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Innovation and elaboration on the avian tree of life

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Data to reproduce the analysis in "Innovation and elaboration on the avian tree of life".


The code to reproduce the analyses can be found on GitHub: https://github.com/TGuillerme/elaboration_exploration_bird_beaks


This folder contains all the raw and cluster-ran data used for the analysis.

[![DOI](https://zenodo.org/badge/337779300.svg)](https://zenodo.org/badge/latestdoi/337779300)


This folder contains the specific sub-folders:


## Raw

Contains the beak data (in `Beak_data`), the trees (in `Tree_data`) and the clades information.


## Processed

This folder contains the results of the `mcmcmcglmmm` for all birds (`shapespace_allbirds_lvl_superorder_order.MCMCglmm`) and for the passeriformes (`shapespace_passeriformes.MCMCglmm`).

These data can be calculated using the [`02-mcmcmcglmmm_analysis.Rmd`](https://github.com/TGuillerme/elaboration_exploration_bird_beaks/tree/master/Analysis) but takes 3 CPU years.

Funding

This work was funded by UKRI-NERC Grant NE/T000139/1 and a Royal Society University Research Fellowship (URF R 180006 to GHT).

History

Ethics

There is no personal data or any that requires ethical approval

Policy

The data complies with the institution and funders' policies on access and sharing

Sharing and access restrictions

The data can be shared openly

Data description

  • The file formats are open or commonly used

Methodology, headings and units

  • There is a file including methodology, headings and units, such as a readme.txt