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quicKM: an online tool for speedy survival analysis

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posted on 27.02.2022, 22:03 by Lewis QuayleLewis Quayle
quicKM is an online application offering rapid and user-friendly analysis of pre-curated open-access RNA sequencing data and corresponding clinical case files. The quicKM survival analysis plotting tool is able to establish the correlation between expression of over 30,000 genes and patient survival across the "big four" cancers, including breast, prostate, lung and colon cancer. Unlike other online survival analysis tools, quicKM can calculate an integrated expression value for multiple input genes prior to running survival analysis, making it possible to establish the prognostic value of gene and cell-type signatures or entire pathways. The primary purpose of the tool is a meta-analysis based discovery and validation of survival biomarkers.

quicKM is current available at:

http://quickm.org
https://sheffield-university.shinyapps.io/quicKM/

History

Ethics

There is no personal data or any that requires ethical approval

Policy

The data complies with the institution and funders' policies on access and sharing

Sharing and access restrictions

The data can be shared openly

Data description

  • The file formats are open or commonly used

Methodology, headings and units

  • Headings and units are explained in the files